Studies
|
51,819 |
|
Biosamples
|
152,092 |
|
Sequencing Projects
|
451,181 |
|
Analysis Projects
|
342,372 |
| Organisms | 427,779 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0499909 |
| Analysis Project Name Prefix |
Soil microbial communities from microcosm experiment in Pacific Northwest National Lab, Richland, Washington, USA - TR20 |
|
Analysis Project Name Suffix
|
|
|
Analysis Project Type
|
Metatranscriptome Analysis |
|
IMG Submission ID
|
257821 |
| Completion Status |
Complete |
|
IMG Completion Date
|
2021-11-07 |
| PI | Vanessa Bailey |
|
Analysis Project Description
|
|
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
|
Assembly Method
(MIGS-30)
|
megahit v. 2021-10-13 10:53:15 - MEGAHIT v1.2.9 |
|
Scaffold Count
|
35847 |
|
Contig Count
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
52720 |
| Estimated Size |
32600124 |
|
Sequencing Depth
(MIGS-31.1)
|
|
| Annotation Pipeline |
IMG Annotation Pipeline v.5.0.25 |
| Added By |
JGI automated process
on 2021-08-17 |
| Last Modified By |
JGI automated process
on 2021-11-08 |
|
ORF Comparison Tools
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
3300048843 |
| IMG RNA-Seq ID |
|
|
Genbank Accession
|
|
| Genbank Release Date |
|
| SRA Runs |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Soil microbial communities from microcosm experiment in Pacific Northwest National Lab, Richland, Washington, USA |
|
Number of Studies
|
1 |
|
Number of Biosamples
|
1 |
|
Number of Projects
|
1 |
|
Number of Related Analysis Projects
|
1 |
| JGI INFORMATION | |
| JGI Data Utilization Status |
Unrestricted |
|
ITS Analysis Project ID
|
1311064 (Portal) |
|
ITS Analysis Project Name
|
TR20 metaT Annotation |
|
ITS Analysis Product Name
|
Metagenome Metatranscriptome |
| ITS Version Number |
1 |
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