ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0499909
Analysis Project Name Prefix Soil microbial communities from microcosm experiment in Pacific Northwest National Lab, Richland, Washington, USA - TR20
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 257821
Completion Status Complete
IMG Completion Date 2021-11-07
PI Vanessa Bailey
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 2021-10-13 10:53:15 - MEGAHIT v1.2.9
Scaffold Count 35847
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 52720
Estimated Size 32600124
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.25
Added By JGI automated process on 2021-08-17
Last Modified By JGI automated process on 2021-11-08
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300048843
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Soil microbial communities from microcosm experiment in Pacific Northwest National Lab, Richland, Washington, USA
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1311064 (Portal)
ITS Analysis Project Name TR20 metaT Annotation
ITS Analysis Product Name Metagenome Metatranscriptome
ITS Version Number 1

 

 

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