Studies
|
49,818 |
|
Biosamples
|
146,892 |
|
Sequencing Projects
|
434,029 |
|
Analysis Projects
|
326,434 |
| Organisms | 417,209 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0496337 |
| Analysis Project Name Prefix |
Metatranscriptome of soil microbial communities from microcosm experiment in Pacific Northwest National Lab, Richland, Washington, USA - TR1 |
|
Analysis Project Name Suffix
|
|
|
Analysis Project Type
|
Metatranscriptome mapping (self) |
|
IMG Submission ID
|
255277 |
| Completion Status |
Incomplete |
|
IMG Completion Date
|
|
| PI | Vanessa Bailey |
|
Analysis Project Description
|
|
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
|
Assembly Method
(MIGS-30)
|
|
|
Scaffold Count
|
|
|
Contig Count
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
|
| Estimated Size |
|
|
Sequencing Depth
(MIGS-31.1)
|
|
| Annotation Pipeline |
|
| Added By |
JGI automated process
on 2021-06-01 |
| Last Modified By |
JGI automated process
on 2021-08-19 |
|
ORF Comparison Tools
|
|
|
16S Recovered
|
|
|
16S Recovery Software
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
|
| IMG RNA-Seq ID |
10632 |
|
Genbank Accession
|
|
| Genbank Release Date |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Soil microbial communities from microcosm experiment in Pacific Northwest National Lab, Richland, Washington, USA |
|
Number of Projects
|
1 |
| Reference Analysis Project |
Metatranscriptome of soil microbial communities from microcosm experiment in Pacific Northwest National Lab, Richland, Washington, USA - TR1 (Metagenome Metatranscriptome) |
| JGI INFORMATION | |
|
ITS Analysis Project ID
|
1311008 (Portal) |
|
ITS Analysis Project Name
|
TR1 metaT Expression - Self |
|
ITS Analysis Product Name
|
Metagenome Metatranscriptome Expression - Self |
| ITS Version Number |
1 |
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