ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0496081
Analysis Project Name Prefix Metatranscriptome of soil microbial communities from microcosm experiment in Pacific Northwest National Lab, Richland, Washington, USA - TR1
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 254698
Completion Status Complete
IMG Completion Date 2021-08-15
PI Vanessa Bailey
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 2021-08-01 09:02:10 - MEGAHIT v1.2.9
Scaffold Count 133881
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 164524
Estimated Size 102073033
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.23
Added By JGI automated process on 2021-05-29
Last Modified By JGI automated process on 2021-09-16
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300046800
IMG RNA-Seq ID
IMG Metagenome bin count 0
IMG Predicted viruses
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Soil microbial communities from microcosm experiment in Pacific Northwest National Lab, Richland, Washington, USA
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
JGI INFORMATION
ITS Analysis Project ID 1311007 (Portal)
ITS Analysis Project Name TR1 metaT Annotation
ITS Analysis Product Name Metagenome Metatranscriptome
ITS Version Number 1

 

 

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