ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0496032
Analysis Project Name Metatranscriptome of peat moss microbial communities from bog in Southern Region, Iceland - Sphagnum auriculatum 4_AUR_ICE (Eukaryote Community Metatranscriptome)
Analysis Project Name Stem Metatranscriptome of peat moss microbial communities from bog in Southern Region, Iceland - Sphagnum auriculatum 4_AUR_ICE
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 269007
Completion Status Complete
IMG Completion Date 2022-05-13
PI David Weston
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 2022-04-21 17:09:20 - MEGAHIT v1.2.9
Scaffold Count 238568
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 325099
Estimated Size 154219272
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.1.5
Added By JGI automated process on 2021-05-29
Last Modified By JGI automated process on 2022-05-16
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300052651
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Peat moss microbial communities from sphagnum bogs in various regions of Europe
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1304799 (Portal)
ITS Analysis Project Name Sphagnum auriculatum 4_AUR_ICE_RNA metatranscriptome
ITS Analysis Product Name Eukaryote Community Metatranscriptome
ITS Version Number 1
JGI Award DOI 10.46936/10.25585/60001200

 

 

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