ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0494569
Analysis Project Name Seawater microbial communities from Southern California Bight, CA, United States - Newport_SRmetag_190625.NP1
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 255815
Completion Status Complete
IMG Completion Date 2021-09-07
PI Alyse Larkin-Swartout
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) metaspades v. 3.15.2
Scaffold Count 416664
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 538431
Estimated Size 254069394
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.24
Added By JGI automated process on 2021-04-09
Last Modified By JGI automated process on 2022-05-25
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300047452
IMG Metagenome bin count 6
IMG Predicted viruses
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Sorted cell/s from seawater in Southern California Bight, CA, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
JGI Data Utilization Status Restricted
ITS Analysis Project ID 1309009 (Portal)
ITS Analysis Project Name Newport_SRmetag_190625.NP1
ITS Analysis Product Name Metagenome Minimal Draft
ITS Version Number 1
JGI Award DOI 10.46936/10.25585/60001365

 

 

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