ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0494568
Analysis Project Name Seawater microbial communities from Southern California Bight, CA, United States - Newport_SRmetag_190424.NP2
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 255698
Completion Status Complete
IMG Completion Date 2021-09-06
PI Alyse Larkin-Swartout
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) metaspades v. 3.15.2
Scaffold Count 946501
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1390683
Estimated Size 701480741
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.24
Added By JGI automated process on 2021-04-09
Last Modified By JGI automated process on 2022-05-25
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300047357
IMG Metagenome bin count 10
IMG Predicted viruses
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Sorted cell/s from seawater in Southern California Bight, CA, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
JGI Data Utilization Status Restricted
ITS Analysis Project ID 1309007 (Portal)
ITS Analysis Project Name Newport_SRmetag_190424.NP2
ITS Analysis Product Name Metagenome Minimal Draft
ITS Version Number 1
JGI Award DOI 10.46936/10.25585/60001365

 

 

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