ANALYSIS PROJECT INFORMATION | |
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GOLD Analysis Project ID
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Ga0493956 |
Analysis Project Name |
Enriched cells of subseafloor coalbed in Japanese EEZ, North Pacific Ocean - Sorted_minimetagenome_CSP506582_6119.15R2.36.T2.MeAM.D4 |
Analysis Project Name Suffix
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Analysis Project Type
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Metagenome - Cell Enrichment |
IMG Submission ID
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252354 |
Completion Status |
Complete |
IMG Completion Date
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2021-04-22 |
PI | Elizabeth Trembath-Reichert |
Analysis Project Description
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Visibility | Public |
ANALYSIS PROJECT METADATA | |
Assembly Method
(MIGS-30)
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metaspades v. 3.14.1 |
Scaffold Count
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2956 |
Contig Count
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Gene Calling Method
(MIGS-32)
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Gene Count |
3269 |
Estimated Size |
1163629 |
Sequencing Depth
(MIGS-31.1)
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Genbank Anomalous Assembly |
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Genbank Anomalous Reason |
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Annotation Pipeline |
IMG Annotation Pipeline v.5.0.23 |
Added By | JGI automated process on 2021-04-01 |
Last Modified By | JGI automated process on 2022-05-25 |
ORF Comparison Tools
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PROJECT EXTERNAL REFERENCES | |
IMG Taxon ID
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3300044909 |
Genbank Accession
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Genbank Release Date |
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SRA Runs |
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ANALYSIS PROJECT COMPOSITION | |
Study |
Deep subseafloor coalbed microbial communities from Japanese EEZ, North Pacific Ocean |
Number of Studies
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1 |
Number of Biosamples
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1 |
Number of Projects
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1 |
Number of Related Analysis Projects
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0 |
Derived Analysis Projects (DAP)
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0 |
JGI INFORMATION | |
JGI Data Utilization Status
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Restricted |
ITS Analysis Project ID
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1302112 (Portal) |
ITS Analysis Project Name
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Sorted_minimetagenome_CSP506582_6119.15R2.36.T2.MeAM.D4 |
ITS Analysis Product Name
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Unamplified, Random, Cell Enrichment |
ITS Version Number |
1 |
Library Names
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HCGSZ |
JGI Award DOI
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