ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0485799
Analysis Project Name Prefix Cand. Thiomargarita magnifica 75
Analysis Project Name Suffix
Analysis Project Type Metagenome-Assembled Genome
IMG Submission ID 250460
NCBI BioProject Accession
NCBI BioSample Accession
Completion Status Complete
IMG Completion Date 2021-03-20
PI Jean-Marie Volland
Analysis Project Description Thiomargarita from mangrove seawater in Basse-Terre, Guadeloupe
Visibility Public
ANALYSIS PROJECT METADATA
GOLD Organism Name Cand. Thiomargarita magnifica 75
NCBI Taxonomy ID 90372
Phylum PROTEOBACTERIA-GAMMA
Phylogeny Suggestion
Genus Thiomargarita
Species Cand. Thiomargarita magnifica
Strain 75
Domain BACTERIAL
NCBI Superkingdom Bacteria
NCBI Kingdom
Number of tRNAs
tRNA Software
Completeness Strategy Marker Gene
Scaffold Count 2196
Contig Count
Binning Method custom
Binning Parameters Codon Usage
Reassembly Attempted No
MAG Coverage Software Bbmap
Gene Calling Method (MIGS-32)
Gene Count 17160
Estimated Size 16475702
Sequencing Depth (MIGS-31.1)
Contamination Percentage 3
Completeness Percentage
Annotation Pipeline IMG Annotation Pipeline v.5.0.23
Added By Galina Ovchinnikova on 2021-03-01
Last Modified By JGI automated process on 2021-11-27
ORF Comparison Tools
16S Recovered No
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2926625205
Genbank Accession
Genbank Release Date
Genome Publication
ANALYSIS PROJECT COMPOSITION
Study Thiomargarita filaments from Guadeloupe
Source Analysis Project Enriched cells from mangrove seawater in Basse-Terre, Guadeloupe - Cand. Thiomargarita magnifica 75

 

 

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