ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0485172
Analysis Project Name Freshwater bacterial communities from Lake Mendota, Wisconsin, United States - ME_2020-10-19_5m_Bacteria_A
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 252473
Completion Status Complete
IMG Completion Date 2021-04-23
PI Karthik Anantharaman
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) metaspades v. 3.14.1
Scaffold Count 545109
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1003698
Estimated Size 638130923
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.23
Added By JGI automated process on 2021-02-13
Last Modified By JGI automated process on 2022-05-25
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300044922
IMG Metagenome bin count 22
IMG Predicted viruses
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Freshwater bacterial and viral communities from Lake Mendota, Wisconsin, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
JGI Data Utilization Status Restricted
ITS Analysis Project ID 1294585 (Portal)
ITS Analysis Project Name ME_2020-10-19_5m_Bacteria_A
ITS Analysis Product Name Metagenome Standard Draft
ITS Version Number 1
Library Names HGXSU
JGI Award DOI