ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0485170
Analysis Project Name Prefix Freshwater bacterial communities from Lake Mendota, Wisconsin, United States - ME_2020-10-19_15m_Bacteria_A
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 252471
Completion Status Complete
IMG Completion Date 2021-04-23
PI Karthik Anantharaman
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) metaspades v. 3.14.1
Scaffold Count 492335
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 908115
Estimated Size 581759006
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.23
Added By JGI automated process on 2021-02-13
Last Modified By JGI automated process on 2021-09-16
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300044912
IMG Metagenome bin count 23
IMG Predicted viruses
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Freshwater bacterial and viral communities from Lake Mendota, Wisconsin, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
ITS Analysis Project ID 1294581 (Portal)
ITS Analysis Project Name ME_2020-10-19_15m_Bacteria_A
ITS Analysis Product Name Metagenome Standard Draft
ITS Version Number 1

 

 

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