ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0484863
Analysis Project Name Prefix Desert spring benthic microbial communities from California, United States - Upper Travertine Spring (UTS_S3)
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 249431
Completion Status Complete
IMG Completion Date 2021-02-12
PI Ramunas Stepanauskas
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) metaspades v. 3.14.1
Scaffold Count 582361
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1156904
Estimated Size 769865976
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.23
Added By JGI automated process on 2021-02-04
Last Modified By JGI automated process on 2021-02-12
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300043180
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Bacterial and archaeal communities from various locations to study Microbial Dark Matter (Phase II)
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 2
Derived Analysis Projects (DAP) 0
JGI INFORMATION
ITS Analysis Project ID 1307510 (Portal)
ITS Analysis Project Name UTS_S3_MG coverage test 16Gb
ITS Analysis Product Name Metagenome Standard Draft
ITS Version Number 2

 

 

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