ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0484181
Analysis Project Name Prefix Sorted cell/s from microbial mat in river backwater pond, North Slope, Alaska, USA - Uncultured microbe JGI_EMERSN.Seep2B.SYBR.2.E22
Analysis Project Name Suffix
Analysis Project Type Metagenome - Single Particle Sort
IMG Submission ID 251585
Completion Status Complete
IMG Completion Date 2021-03-27
PI David Emerson
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.15.0
Scaffold Count 8
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 40
Estimated Size 29345
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.23
Added By JGI automated process on 2021-01-22
Last Modified By JGI automated process on 2021-03-29
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300044094
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Sediment chemolithoautotrophic microbial communities from various locations
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
ITS Analysis Project ID 1305372 (Portal)
ITS Analysis Project Name Uncultured microbe JGI_EMERSN.Seep2B.SYBR.2.E22
ITS Analysis Product Name Single Particle Sort, 16S Negative, Unscreened
ITS Version Number 1

 

 

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