Studies
|
56,334 |
|
Biosamples
|
196,988 |
|
Sequencing Projects
|
525,360 |
|
Analysis Projects
|
384,991 |
| Organisms | 484,221 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0484094 |
| Analysis Project Name |
Sorted cell/s from lab media in Berkeley, California, United States - SPS_viraltag_JGI_H497-M06 |
|
Analysis Project Name Suffix
|
|
|
Analysis Project Type
|
Metagenome - Single Particle Sort |
|
IMG Submission ID
|
251574 |
| Completion Status |
Complete |
|
IMG Completion Date
|
2021-03-26 |
| PI | Simon Roux |
|
Analysis Project Description
|
|
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
|
Assembly Method
(MIGS-30)
|
spades v. 3.15.0 |
|
Scaffold Count
|
17 |
|
Contig Count
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
74 |
| Estimated Size |
72048 |
|
Sequencing Depth
(MIGS-31.1)
|
|
| Genbank Anomalous Assembly |
|
| Genbank Anomalous Reason |
|
| Annotation Pipeline |
IMG Annotation Pipeline v.5.0.23 |
| Added By | JGI automated process on 2021-01-22 |
| Last Modified By | JGI automated process on 2022-05-25 |
|
ORF Comparison Tools
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
3300044082 |
|
Genbank Accession
|
|
| Genbank Release Date |
|
| SRA Runs |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
High-throughput characterization of viral-host interactions |
|
Number of Studies
|
1 |
|
Number of Biosamples
|
1 |
|
Number of Projects
|
1 |
|
Number of Related Analysis Projects
|
0 |
|
Derived Analysis Projects (DAP)
|
0 |
| JGI INFORMATION | |
|
JGI Data Utilization Status
|
Restricted |
|
ITS Analysis Project ID
|
1305095 (Portal) |
|
ITS Analysis Project Name
|
SPS_viraltag_JGI_H497-M06 |
|
ITS Analysis Product Name
|
Single Particle Sort, 16S Negative, Unscreened |
| ITS Version Number |
1 |
|
Library Names
|
HCWAS |
|
JGI Award DOI
|
10.46936/10.25585/60001370 |
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