ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0484019
Analysis Project Name Prefix Metatranscriptome of soil communities from Duke University greenhouse, North Carolina, United States - AA75b
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 251105
Completion Status Complete
IMG Completion Date 2021-03-26
PI Jennifer Bhatnagar
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 2021-03-04 22:42:06 - MEGAHIT v1.2.9
Scaffold Count 207464
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 224497
Estimated Size 103712729
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.23
Added By JGI automated process on 2021-01-22
Last Modified By JGI automated process on 2021-03-26
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300043901
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Soil microbial communities from Duke University greenhouse, North Carolina, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
JGI INFORMATION
ITS Analysis Project ID 1297286 (Portal)
ITS Analysis Project Name Suillus cothurnatus - Pinus taeda AA75b Metatranscriptome
ITS Analysis Product Name Eukaryote Community Metatranscriptome
ITS Version Number 1

 

 

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