Studies
|
49,622 |
|
Biosamples
|
133,253 |
|
Sequencing Projects
|
410,885 |
|
Analysis Projects
|
321,348 |
| Organisms | 410,938 |
| ANALYSIS PROJECT INFORMATION | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
GOLD Analysis Project ID
|
Ga0483768 |
||||||||||||||||||
| Analysis Project Name Prefix |
Citrobacter sp. H12-3-2 |
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|
Analysis Project Name Suffix
|
|
||||||||||||||||||
|
Analysis Project Type
|
Genome Analysis (Isolate) |
||||||||||||||||||
|
IMG Submission ID
|
247564 | ||||||||||||||||||
| Completion Status |
Complete |
||||||||||||||||||
|
IMG Completion Date
|
2021-01-23 |
||||||||||||||||||
| PI | |||||||||||||||||||
|
Analysis Project Description
|
Submitting a public genome from NCBI/GenBank to IMG for analysis. |
||||||||||||||||||
| Visibility | Public | ||||||||||||||||||
| ANALYSIS PROJECT METADATA | |||||||||||||||||||
|
Assembly Method
(MIGS-30)
|
Unicycler v. 0.4.1 |
||||||||||||||||||
|
IMG Decontamination
|
No |
||||||||||||||||||
|
IMG Decontamination Method
|
|
||||||||||||||||||
|
Scaffold Count
|
3 |
||||||||||||||||||
|
Contig Count
|
3 |
||||||||||||||||||
|
Gene Calling Method
(MIGS-32)
|
|
||||||||||||||||||
| Gene Count |
5079 |
||||||||||||||||||
| Estimated Size |
5143213 |
||||||||||||||||||
|
Sequencing Depth
(MIGS-31.1)
|
100x |
||||||||||||||||||
| Annotation Pipeline |
IMG Annotation Pipeline v.5.0.20 |
||||||||||||||||||
| Added By |
JGI automated process
on 2021-01-06 |
||||||||||||||||||
| Last Modified By |
JGI automated process
on 2021-02-03 |
||||||||||||||||||
|
ORF Comparison Tools
|
|
||||||||||||||||||
|
16S Recovered
|
|
||||||||||||||||||
|
16S Recovery Software
|
|
||||||||||||||||||
| PROJECT EXTERNAL REFERENCES | |||||||||||||||||||
|
IMG Taxon ID
|
2916183772 |
||||||||||||||||||
|
Genbank Accession
|
|
||||||||||||||||||
| Genbank Release Date |
2020-11-13 |
||||||||||||||||||
| ANALYSIS PROJECT COMPOSITION | |||||||||||||||||||
| Study |
Whole genome sequencing of Citrobacter fluoride isolated from flower and their surrounding environment Assembly |
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|
Number of Studies
|
1 |
||||||||||||||||||
|
Number of Projects
|
1 |
||||||||||||||||||
|
Number of Related Analysis Projects
|
0 |
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