ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0480850
Analysis Project Name Prefix Sorted cell/s from seawater in Southern California Bight, CA, United States - Uncultured microbe JGI_Larkin.1410.SYBR.2.I19
Analysis Project Name Suffix
Analysis Project Type Metagenome - Single Particle Sort
IMG Submission ID 251670
Completion Status Complete
IMG Completion Date 2021-03-27
PI Alyse Larkin-Swartout
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.15.0
Scaffold Count 61
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 367
Estimated Size 269923
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.23
Added By JGI automated process on 2020-12-23
Last Modified By JGI automated process on 2021-03-29
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300044181
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Sorted cell/s from seawater in Southern California Bight, CA, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
ITS Analysis Project ID 1301396 (Portal)
ITS Analysis Project Name Uncultured microbe JGI_Larkin.1410.SYBR.2.I19
ITS Analysis Product Name Single Particle Sort, 16S Negative, Unscreened
ITS Version Number 1

 

 

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