ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0480661
Analysis Project Name Prefix Metatrasiptome of soil microbial communities from artificial tropical rainforest in Tucson, Arizona, USA - UA_B2_WALD P26SSC2_191112_c
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 252990
Completion Status Complete
IMG Completion Date 2021-05-10
PI Malak Tfaily
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 2021-04-23 20:37:42 - MEGAHIT v1.2.9
Scaffold Count 96476
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 111631
Estimated Size 44027844
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.23
Added By JGI automated process on 2020-12-23
Last Modified By JGI automated process on 2021-05-10
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300045469
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Soil microbial communities from artificial tropical rainforest in Tucson, Arizona, USA
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
JGI INFORMATION
ITS Analysis Project ID 1292333 (Portal)
ITS Analysis Project Name UA_B2_WALD_metaT P26SSC2_191112_c Annotation
ITS Analysis Product Name Metagenome Metatranscriptome
ITS Version Number 1

 

 

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