ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0480057
Analysis Project Name Variovorax sp. CSUSB
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 246070
Completion Status Complete
IMG Completion Date 2021-01-04
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Unicycler-Hybrid v. 0.4.8.0
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 1
Contig Count 1
Gene Calling Method (MIGS-32)
Gene Count 5278
Estimated Size 5574400
Sequencing Depth (MIGS-31.1) 885.56x Nanopore, 55.54x Illumina
Genbank Anomalous Assembly No
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.20
Added By JGI automated process on 2020-12-21
Last Modified By JGI automated process on 2021-01-15
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2911928411
Genbank Accession
Genbank ID CP046622 (GCA_009755665.1)
Release Date 2020-03-10
NCBI Genbank Version CP046622.1
Genbank Release Date 2020-03-10
ANALYSIS PROJECT COMPOSITION
Study Genome Sequencing of Variovorax sp. CSUSB
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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