ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0455699
Analysis Project Name Prefix Soil microbial communities from forest in Santa Rita do Passa , Quatro, Sao Paulo, Brazil - FOR-W_1
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 242824
Completion Status Complete
IMG Completion Date 2020-11-11
PI
Analysis Project Description Assembly and annotation of public SRA data set.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Custom JGI assembly.
Scaffold Count 37161
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 48987
Estimated Size 24218563
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.20
Added By JGI automated process on 2020-10-13
Last Modified By JGI automated process on 2021-10-11
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300042067
IMG Metagenome bin count 1
IMG Predicted viruses
Genbank Accession
Genbank Release Date
SRA Runs
 
SRA Run Id SRR12696334  (Link to NCBI )
ANALYSIS PROJECT COMPOSITION
Study Forest and sugarcane field soil microbial communities from Santa Rita do Passa , Quatro, Sao Paulo, Brazil
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0

 

 

  You are going to add the following user to your analysis project, project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your analysis project, project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the AP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Changing the AP visibility will also change downgrade visibility on the following items:

 

Do you want to continue with this visibility change?