ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0454208
Analysis Project Name Variovorax sp. 1615
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 243696
Completion Status Complete
IMG Completion Date 2020-11-16
PI Daniel Schachtman
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.14.1
IMG Decontamination
IMG Decontamination Method
Scaffold Count 42
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 8296
Estimated Size 8915136
Sequencing Depth (MIGS-31.1) 97x
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.20
Added By JGI automated process on 2020-09-19
Last Modified By JGI automated process on 2022-06-14
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2904541872
Genbank Accession
Genbank ID JAFICL000000000
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Sorghum-associated microbial communities from plants grown in Nebraska, USA
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
JGI Data Utilization Status Restricted
ITS Analysis Project ID 1275707 (Portal)
ITS Analysis Project Name Variovorax sp 1615
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS Version Number 1
JGI Award DOI 10.46936/10.25585/60001066

 

 

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