ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0453632
Analysis Project Name Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_PF_150_PacBio MetaG
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 239433
Completion Status Complete
IMG Completion Date 2020-09-10
PI Frank Stewart
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) metaFlye v. 2.5-release
Scaffold Count 272
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1296
Estimated Size 1100379
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.19
Added By JGI automated process on 2020-09-09
Last Modified By JGI automated process on 2022-05-25
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300041485
IMG Metagenome bin count 0
IMG Predicted viruses
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Microbial and viral regulation of community carbon cycling across diverse low-oxygen zones
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1287662 (Portal)
ITS Analysis Project Name ETNP2014_PF_150_PacBio MetaG Hybrid Assembly(v2)
ITS Analysis Product Name Metagenome Improved Draft
ITS Version Number 2
JGI Award DOI 10.46936/10.25585/60000893

 

 

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