Studies
|
56,035 |
|
Biosamples
|
191,586 |
|
Sequencing Projects
|
515,842 |
|
Analysis Projects
|
381,622 |
| Organisms | 480,341 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0450804 |
| Analysis Project Name |
Combined Assembly of Brackish water microbial mat communities from the Etang de Berre and Salins du Lion, France |
| Analysis Project Name Stem |
Combined Assembly of |
|
Analysis Project Name Suffix
|
Brackish water microbial mat communities from the Etang de Berre and Salins du Lion, France |
|
Analysis Project Type
|
Combined Assembly |
|
IMG Submission ID
|
237000 |
| Completion Status |
Complete |
|
IMG Completion Date
|
2020-08-04 |
| PI | Adrien Vigneron |
|
Analysis Project Description
|
Metagenomics of microbial mats |
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
|
Assembly Method
(MIGS-30)
|
megahit v. 1.11 |
|
IMG Decontamination
|
No |
|
IMG Decontamination Method
|
|
|
Scaffold Count
|
4415091 |
|
Contig Count
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
9591826 |
| Estimated Size |
6728375366 |
|
Sequencing Depth
(MIGS-31.1)
|
|
| Genbank Anomalous Assembly |
|
| Genbank Anomalous Reason |
|
| Annotation Pipeline |
IMG Annotation Pipeline v.5.0.19 |
| Added By | Adrien Vigneron on 2020-07-27 |
| Last Modified By | JGI automated process on 2021-10-20 |
|
ORF Comparison Tools
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
3300040801 |
|
Genbank Accession
|
|
| Genbank Release Date |
|
| SRA Runs |
|
| Genome Publication |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Brackish water microbial mat communities from the Etang de Berre and Salins du Lion, France |
|
Number of Studies
|
1 |
|
Number of Biosamples
|
27 |
|
Number of Projects
|
27 |
|
Number of Related Analysis Projects
|
27 |
|
Derived Analysis Projects (DAP)
|
0 |
You are going to add the following user to your analysis project, project, biosample and study.
Contact Name/Email: Do you want to continue?
You are going to remove permissions for the following user to your analysis project, project, biosample and study.
Contact Name/Email: Do you want to continue?
Changing the AP visibility will also change visibility on the following items:
Do you want to continue with this visibility change?
Changing the AP visibility will also change downgrade visibility on the following items:
Do you want to continue with this visibility change?
