ANALYSIS PROJECT INFORMATION | |
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GOLD Analysis Project ID
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Ga0450799 |
Analysis Project Name |
Brackish water microbial mat communities from the Salins du Lion, Vitrolles, France - D325 |
Analysis Project Name Suffix
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Analysis Project Type
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Metagenome Analysis |
IMG Submission ID
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236994 |
Completion Status |
Complete |
IMG Completion Date
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2020-08-03 |
PI | Adrien Vigneron |
Analysis Project Description
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Metagenomics of microbial mat from the Salins du Lion |
Visibility | Public |
ANALYSIS PROJECT METADATA | |
Assembly Method
(MIGS-30)
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megahit v. 1.11 |
Scaffold Count
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509545 |
Contig Count
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Gene Calling Method
(MIGS-32)
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Gene Count |
743822 |
Estimated Size |
383096031 |
Sequencing Depth
(MIGS-31.1)
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Genbank Anomalous Assembly |
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Genbank Anomalous Reason |
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Annotation Pipeline |
IMG Annotation Pipeline v.5.0.19 |
Added By | Adrien Vigneron on 2020-07-27 |
Last Modified By | JGI automated process on 2021-10-20 |
ORF Comparison Tools
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PROJECT EXTERNAL REFERENCES | |
IMG Taxon ID
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3300040795 |
IMG Metagenome bin count |
11 |
IMG Predicted viruses |
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Genbank Accession
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Genbank Release Date |
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SRA Runs |
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ANALYSIS PROJECT COMPOSITION | |
Study |
Brackish water microbial mat communities from the Etang de Berre and Salins du Lion, France |
Number of Studies
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1 |
Number of Biosamples
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1 |
Number of Projects
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1 |
Number of Related Analysis Projects
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1 |
Derived Analysis Projects (DAP)
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0 |
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