ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0450784
Analysis Project Name Brackish water microbial mat communities from the Etang de Berre, Marignane, France - D170L3
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 236983
Completion Status Complete
IMG Completion Date 2020-08-03
PI Adrien Vigneron
Analysis Project Description Metagenomics of microbial mat from the Etang de Berre
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 1.11
Scaffold Count 707613
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1032166
Estimated Size 531373013
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.19
Added By Adrien Vigneron on 2020-07-27
Last Modified By JGI automated process on 2021-10-20
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300040781
IMG Metagenome bin count 21
IMG Predicted viruses
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Brackish water microbial mat communities from the Etang de Berre and Salins du Lion, France
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
Derived Analysis Projects (DAP) 0

 

 

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