ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0450664
Analysis Project Name Prefix Methylophaga sp. SM14
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 236406
Completion Status Complete
IMG Completion Date 2020-07-31
PI William Whitman
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.10.1
IMG Decontamination
IMG Decontamination Method
Scaffold Count 19
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 2897
Estimated Size 2889964
Sequencing Depth (MIGS-31.1) 360x
Annotation Pipeline IMG Annotation Pipeline v.5.0.18
Added By JGI automated process on 2020-07-22
Last Modified By JGI automated process on 2021-04-09
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2880941384
Genbank Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Genomic Encyclopedia of Type Strains, Phase III (KMG-III): the genomes of soil and plant-associated and newly described type strains
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 1
JGI INFORMATION
ITS Analysis Project ID 1282953 (Portal)
ITS Analysis Project Name Methylophaga sp. SM14 (Reannotation)
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS Version Number 2

 

 

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