Studies
|
56,337 |
|
Biosamples
|
196,975 |
|
Sequencing Projects
|
525,356 |
|
Analysis Projects
|
385,119 |
| Organisms | 484,232 |
| ANALYSIS PROJECT INFORMATION | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
GOLD Analysis Project ID
|
Ga0443223 |
||||||||||||||||||
| Analysis Project Name |
Rathayibacter sp. VKM Ac-2760 |
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|
Analysis Project Name Suffix
|
|
||||||||||||||||||
|
Analysis Project Type
|
Genome Analysis (Isolate) |
||||||||||||||||||
|
IMG Submission ID
|
238700 | ||||||||||||||||||
| Completion Status |
Complete |
||||||||||||||||||
|
IMG Completion Date
|
2020-09-08 |
||||||||||||||||||
| PI | Unknown | ||||||||||||||||||
|
Analysis Project Description
|
Submitting a public genome from NCBI/GenBank to IMG for analysis. |
||||||||||||||||||
| Visibility | Public | ||||||||||||||||||
| ANALYSIS PROJECT METADATA | |||||||||||||||||||
|
Assembly Method
(MIGS-30)
|
Unicycler v. 0.4.8 |
||||||||||||||||||
|
IMG Decontamination
|
No |
||||||||||||||||||
|
IMG Decontamination Method
|
|
||||||||||||||||||
|
Scaffold Count
|
3 |
||||||||||||||||||
|
Contig Count
|
|
||||||||||||||||||
|
Gene Calling Method
(MIGS-32)
|
|
||||||||||||||||||
| Gene Count |
4296 |
||||||||||||||||||
| Estimated Size |
4612414 |
||||||||||||||||||
|
Sequencing Depth
(MIGS-31.1)
|
378x |
||||||||||||||||||
| Genbank Anomalous Assembly |
No |
||||||||||||||||||
| Genbank Anomalous Reason |
|
||||||||||||||||||
| Annotation Pipeline |
IMG Annotation Pipeline v.5.0.19 |
||||||||||||||||||
| Added By | JGI automated process on 2020-07-08 | ||||||||||||||||||
| Last Modified By | JGI automated process on 2020-09-18 | ||||||||||||||||||
|
ORF Comparison Tools
|
|
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| PROJECT EXTERNAL REFERENCES | |||||||||||||||||||
|
IMG Taxon ID
|
2888070951 |
||||||||||||||||||
|
Genbank Accession
|
|
||||||||||||||||||
| Genbank Release Date |
2020-03-29 |
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| ANALYSIS PROJECT COMPOSITION | |||||||||||||||||||
| Study |
Rathayibacter genomes sequencing and assembly |
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|
Number of Studies
|
1 |
||||||||||||||||||
|
Number of Projects
|
1 |
||||||||||||||||||
|
Number of Related Analysis Projects
|
0 |
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