ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0442640
Analysis Project Name Prefix Sphingomonas olei NM83_B4-11
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 248978
Completion Status Complete
IMG Completion Date 2021-02-07
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Spades v. 3.10.0
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 42
Contig Count 42
Gene Calling Method (MIGS-32)
Gene Count 3414
Estimated Size 3496927
Sequencing Depth (MIGS-31.1) 100x
Annotation Pipeline IMG Annotation Pipeline v.5.0.23
Added By JGI automated process on 2020-07-07
Last Modified By JGI automated process on 2021-02-22
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2922472954
Genbank Accession
Genbank ID SSTI00000000 (GCA_004801655.1)
Release Date 2020-04-23
NCBI Genbank Version SSTI01
Genbank Release Date 2020-04-23
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing and assembly - library of cultured bacterial species from laboratory mouse gut microbiota from the University of Toronto
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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