ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0440431
Analysis Project Name Shimia sediminis ZQ172
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 237391
Completion Status Complete
IMG Completion Date 2020-08-17
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SOAPdenovo v. 1.05
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 127
Contig Count 127
Gene Calling Method (MIGS-32)
Gene Count 4475
Estimated Size 4367258
Sequencing Depth (MIGS-31.1) 260.0x
Genbank Anomalous Assembly No
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.19
Added By JGI automated process on 2020-07-04
Last Modified By JGI automated process on 2020-08-31
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2884117770
Genbank Accession
Genbank ID RYZK00000000 (GCA_003990645.1)
Release Date 2020-03-04
NCBI Genbank Version RYZK01
Genbank Release Date 2020-03-04
ANALYSIS PROJECT COMPOSITION
Study Shimia sediminis ZQ172 genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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