ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0439261
Analysis Project Name Prefix EAA2017 plots 3/5 metatranscriptome combined assembly
Analysis Project Name Suffix
Analysis Project Type Combined Assembly
IMG Submission ID 241828
Completion Status Complete
IMG Completion Date 2020-10-19
PI Willm Martens-Habbena
PI Name
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 2020-08-31 17:23:09 - MEGAHIT v1.2.9
IMG Decontamination
IMG Decontamination Method
Scaffold Count 2755400
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 4021984
Estimated Size 2289611374
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.19
Added By JGI automated process on 2020-06-13
Last Modified By JGI automated process on 2020-11-08
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300041949
Genbank Accession
Assembly Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Soil microbial communities from Everglades Agricultural Area, Florida, United States
Number of Studies 1
Number of Biosamples 11
Number of Projects 11
Number of Related Analysis Projects 22
Derived Analysis Projects (DAP) 1
JGI INFORMATION
ITS Analysis Project ID 1281239 (Portal)
ITS Analysis Project Name EAA2017 plots 3/5 metatranscriptome combined assembly
ITS Analysis Product Name Co-Assembly - Metagenome Metatranscriptome
ITS Version Number 1

 

 

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