ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0439259
Analysis Project Name Prefix EAA2017 plot 1 metatranscriptome combined assembly
Analysis Project Name Suffix
Analysis Project Type Combined Assembly
IMG Submission ID 241827
Completion Status Complete
IMG Completion Date 2020-10-19
PI Willm Martens-Habbena
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 2020-09-22 00:59:05 - MEGAHIT v1.2.9
IMG Decontamination
IMG Decontamination Method
Scaffold Count 941242
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1395851
Estimated Size 787982677
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.19
Added By JGI automated process on 2020-06-13
Last Modified By JGI automated process on 2021-10-11
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300041948
IMG Metagenome bin count 0
IMG Predicted viruses
Genbank Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Soil microbial communities from Everglades Agricultural Area, Florida, United States
Number of Studies 1
Number of Biosamples 6
Number of Projects 6
Number of Related Analysis Projects 12
Derived Analysis Projects (DAP) 1
JGI INFORMATION
ITS Analysis Project ID 1281234 (Portal)
ITS Analysis Project Name EAA2017 plot 1 metatranscriptome combined assembly
ITS Analysis Product Name Co-Assembly - Metagenome Metatranscriptome
ITS Version Number 1

 

 

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