ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0439198
Analysis Project Name Prefix Combined Assembly of
Analysis Project Name Suffix Lab-enriched soil microbial communities from a contaminated agricultural site, Guadeloupe, France (All HCH)
Analysis Project Type Combined Assembly
IMG Submission ID 234863
Completion Status Complete
IMG Completion Date 2020-07-31
PI Elizabeth A. Edwards
PI Name
Analysis Project Description Metaspades assembly of all HCH metagenomes
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.12.0
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 504479
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1259000
Estimated Size 956027026
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.18
Added By Camilla Nesbø on 2020-06-05
Last Modified By JGI automated process on 2020-08-01
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300040744
Genbank Accession
Assembly Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Metagenomes of anaerobic enrichment cultures that dechlorinate hexachlorocyclohexane isomers
Number of Studies 1
Number of Biosamples 5
Number of Projects 5
Number of Related Analysis Projects 5
Derived Analysis Projects (DAP) 0

 

 

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