ANALYSIS PROJECT INFORMATION | |
---|---|
GOLD Analysis Project ID
![]() |
Ga0439031 |
Analysis Project Name |
Actinotalea sp. SM14_8_bin.1 |
Analysis Project Name Suffix
![]() |
|
Analysis Project Type
![]() |
Metagenome-Assembled Genome |
IMG Submission ID
![]() |
234133 |
NCBI BioProject Accession
![]() |
|
NCBI BioSample Accession
![]() |
|
Completion Status |
Complete |
IMG Completion Date
![]() |
2020-06-03 |
PI | Lauren Tom |
Analysis Project Description
![]() |
MAG from sorghum-adapted microbial community |
Visibility | Public |
ANALYSIS PROJECT METADATA | |
GOLD Organism Name |
Actinotalea sp. SM14_8_bin.1 |
NCBI Taxonomy ID
![]() |
458839 |
Phylum | ACTINOMYCETOTA |
Phylogeny Suggestion |
|
Genus
![]() |
Actinotalea |
Species |
Actinotalea sp. SM14_8_bin.1 |
Strain |
SM14_8_bin.1 |
Domain |
BACTERIAL |
NCBI Superkingdom |
Bacteria |
NCBI Kingdom |
|
Number of tRNAs
![]() |
|
tRNA Software
![]() |
|
Completeness Strategy
![]() |
|
Scaffold Count
![]() |
20 |
Contig Count
![]() |
|
Binning Method
![]() |
MaxBin |
Binning Parameters
![]() |
|
Reassembly Attempted
![]() |
|
MAG Coverage Software
![]() |
|
Gene Calling Method
(MIGS-32)
![]() |
|
Gene Count |
2830 |
Estimated Size |
2984864 |
Sequencing Depth
(MIGS-31.1)
![]() |
|
Contamination Percentage |
0 |
Completeness Percentage |
97.11 |
Genbank Anomalous Assembly |
|
Genbank Anomalous Reason |
|
Annotation Pipeline |
IMG Annotation Pipeline v.5.0.15 |
Added By | Lauren Tom on 2020-05-22 |
Last Modified By | JGI automated process on 2020-06-20 |
ORF Comparison Tools
![]() |
|
16S Recovered
![]() |
|
16S Recovery Software
![]() |
|
PROJECT EXTERNAL REFERENCES | |
IMG Taxon ID
![]() |
2873517181 |
Genbank Accession
![]() |
|
Genbank Release Date |
|
Genome Publication |
|
ANALYSIS PROJECT COMPOSITION | |
Study |
Lab enriched sorghum-adapted microbial communities from Joint BioEnergy Institute, Emeryville, California, United States |
Source Analysis Project |
Sorghum-adapted microbial communities enriched on stacked mutant (SM) sorghum from Joint BioEnergy Institute, Emeryville, California, United States - SM_Day14_8 |
You are going to add the following user to your analysis project, project, biosample and study.
Contact Name/Email: Do you want to continue?
You are going to remove permissions for the following user to your analysis project, project, biosample and study.
Contact Name/Email: Do you want to continue?
Changing the AP visibility will also change visibility on the following items:
Do you want to continue with this visibility change?
Changing the AP visibility will also change downgrade visibility on the following items:
Do you want to continue with this visibility change?