ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0438676
Analysis Project Name Prefix Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bb1
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 232127
Completion Status Complete
IMG Completion Date 2020-05-03
PI Francis M. MARTIN
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. MEGAHIT v1.1.2
Scaffold Count 1085472
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1194463
Estimated Size 571222985
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.15
Added By JGI automated process on 2020-04-18
Last Modified By JGI automated process on 2020-05-04
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300039279
IMG RNA-Seq ID
Genbank Accession
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Forest soil microbial communities from France, Sweden, Spain and USA, for metatranscriptomics studies
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
JGI INFORMATION
ITS Analysis Project ID 1262592 (Portal)
ITS Analysis Project Name Forest Soil Metatranscriptomics Rollainville/France Bb1 redo
ITS Analysis Product Name Eukaryote Community Metatranscriptome
ITS Version Number

 

 

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