ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0438457
Analysis Project Name Prefix Enriched cells from mangrove seawater in Basse-Terre, Guadeloupe - Cand. Thiomargarita magnifica 67
Analysis Project Name Suffix
Analysis Project Type Metagenome - Cell Enrichment
IMG Submission ID 240771
Completion Status Complete
IMG Completion Date 2020-09-27
PI Tanja Woyke
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.14.1
Scaffold Count 1884
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 13909
Estimated Size 14003008
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.19
Added By JGI automated process on 2020-04-07
Last Modified By JGI automated process on 2020-12-06
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300041878
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Studying microbial cell-cell associations in a wide range of aquatic ecosystems
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
ITS Analysis Project ID 1275183 (Portal)
ITS Analysis Project Name Cand. Thiomargarita magnifica - filament genomics- 67
ITS Analysis Product Name Amplified, Targeted, Cell Enrichment
ITS Version Number 1

 

 

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