ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0438075
Analysis Project Name Prefix Sorted cell/s from peatland in MTU Mesocosm Facility, Houghton, MI, USA - JGI_Llskov.PC30cm.SYBR.1.H13
Analysis Project Name Suffix
Analysis Project Type Metagenome - Single Particle Sort
IMG Submission ID 239524
Completion Status Complete
IMG Completion Date 2020-09-16
PI Erik Lilleskov
PI Name
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.14.1
Scaffold Count 48
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 318
Estimated Size 310353
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.19
Added By JGI automated process on 2020-03-18
Last Modified By JGI automated process on 2020-09-17
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300041651
Genbank Accession
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
ITS Analysis Project ID 1277681 (Portal)
ITS Analysis Project Name Uncultured microbe JGI_Llskov.PC30cm.SYBR.1.H13
ITS Analysis Product Name Single Particle Sort, 16S Negative, Unscreened
ITS Version Number 1

 

 

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