ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0437697
Analysis Project Name Prefix Enriched cells from mangrove seawater in Basse-Terre, Guadeloupe - Cand. Thiomargarita magnifica 71
Analysis Project Name Suffix
Analysis Project Type Metagenome - Cell Enrichment
IMG Submission ID 240772
Completion Status Complete
IMG Completion Date 2020-09-26
PI Tanja Woyke
PI Name
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.14.1
Scaffold Count 1494
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 12382
Estimated Size 12800214
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.19
Added By JGI automated process on 2020-03-18
Last Modified By JGI automated process on 2020-10-08
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300041879
Genbank Accession
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Studying microbial cell-cell associations in a wide range of aquatic ecosystems
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
ITS Analysis Project ID 1275191 (Portal)
ITS Analysis Project Name Cand. Thiomargarita magnifica - filament genomics- 71
ITS Analysis Product Name Amplified, Targeted, Cell Enrichment
ITS Version Number 1

 

 

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