Studies
|
47,488 |
|
Biosamples
|
121,419 |
|
Sequencing Projects
|
388,853 |
|
Analysis Projects
|
310,138 |
| Organisms | 403,380 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0436433 |
| Analysis Project Name Prefix |
Aphanocapsa lilacina HA4352-LM1 and co-occurring heterotrophs from rock surface from Maniniholo cave, near Haena, Kauai, HI, United States - 20190625_3 |
|
Analysis Project Name Suffix
|
|
|
Analysis Project Type
|
Metagenome Analysis |
|
IMG Submission ID
|
234093 |
| Completion Status |
Complete |
|
IMG Completion Date
|
2020-05-14 |
| PI | Nicole Pietrasiak |
| PI Name |
|
|
Analysis Project Description
|
|
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
|
Assembly Method
(MIGS-30)
|
metaspades v. 3.13.0 |
|
Scaffold Count
|
38320 |
|
Contig Count
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
148170 |
| Estimated Size |
121604844 |
|
Sequencing Depth
(MIGS-31.1)
|
|
| Annotation Pipeline |
IMG Annotation Pipeline v.5.0.15 |
| Added By |
JGI automated process
on 2020-02-15 |
| Last Modified By |
JGI automated process
on 2021-01-15 |
|
ORF Comparison Tools
|
|
|
16S Recovered
|
|
|
16S Recovery Software
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
3300039303 |
|
Genbank Accession
|
|
| Assembly Accession |
|
| Genbank Release Date |
|
| SRA Runs |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Terrestrial cyanobacterial communities with co-occurring heterotrophs from various environments and locations |
|
Number of Studies
|
1 |
|
Number of Biosamples
|
1 |
|
Number of Projects
|
1 |
|
Number of Related Analysis Projects
|
0 |
|
Derived Analysis Projects (DAP)
|
0 |
| JGI INFORMATION | |
|
ITS Analysis Project ID
|
1266649 (Portal) |
|
ITS Analysis Project Name
|
20190625_3 |
|
ITS Analysis Product Name
|
Metagenome Minimal Draft |
| ITS Version Number |
1 |
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