ANALYSIS PROJECT INFORMATION | |
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GOLD Analysis Project ID
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Ga0436433 |
Analysis Project Name Prefix |
Aphanocapsa lilacina HA4352-LM1 and co-occurring heterotrophs from rock surface from Maniniholo cave, near Haena, Kauai, HI, United States - 20190625_3 |
Analysis Project Name Suffix
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Analysis Project Type
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Metagenome Analysis |
IMG Submission ID
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234093 |
Completion Status |
Complete |
IMG Completion Date
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2020-05-14 |
PI | Nicole Pietrasiak |
PI Name |
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Analysis Project Description
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Visibility | Public |
ANALYSIS PROJECT METADATA | |
Assembly Method
(MIGS-30)
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metaspades v. 3.13.0 |
Scaffold Count
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38320 |
Contig Count
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Gene Calling Method
(MIGS-32)
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Gene Count |
148170 |
Estimated Size |
121604844 |
Sequencing Depth
(MIGS-31.1)
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Annotation Pipeline |
IMG Annotation Pipeline v.5.0.15 |
Added By |
JGI automated process
on 2020-02-15 |
Last Modified By |
JGI automated process
on 2021-01-15 |
ORF Comparison Tools
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16S Recovered
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16S Recovery Software
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PROJECT EXTERNAL REFERENCES | |
IMG Taxon ID
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3300039303 |
Genbank Accession
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Assembly Accession |
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Genbank Release Date |
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SRA Runs |
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ANALYSIS PROJECT COMPOSITION | |
Study |
Terrestrial cyanobacterial communities with co-occurring heterotrophs from various environments and locations |
Number of Studies
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1 |
Number of Biosamples
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1 |
Number of Projects
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1 |
Number of Related Analysis Projects
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0 |
Derived Analysis Projects (DAP)
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0 |
JGI INFORMATION | |
ITS Analysis Project ID
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1266649 (Portal) |
ITS Analysis Project Name
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20190625_3 |
ITS Analysis Product Name
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Metagenome Minimal Draft |
ITS Version Number |
1 |
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