ANALYSIS PROJECT INFORMATION | |
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GOLD Analysis Project ID
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Ga0436375 |
Analysis Project Name |
Combined Assembly of Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil |
Analysis Project Name Stem |
Combined Assembly of |
Analysis Project Name Suffix
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Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil |
Analysis Project Type
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Combined Assembly |
IMG Submission ID
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228884 |
Completion Status |
Complete |
IMG Completion Date
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2020-03-24 |
PI | Rafael Oliveira |
Analysis Project Description
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Co-assembly of Barbacenia exposed rock samples |
Visibility | Public |
ANALYSIS PROJECT METADATA | |
Assembly Method
(MIGS-30)
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MEGAHIT v. 1.2.7 |
IMG Decontamination
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No |
IMG Decontamination Method
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|
Scaffold Count
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1050134 |
Contig Count
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|
Gene Calling Method
(MIGS-32)
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|
Gene Count |
2798050 |
Estimated Size |
2107126167 |
Sequencing Depth
(MIGS-31.1)
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|
Genbank Anomalous Assembly |
|
Genbank Anomalous Reason |
|
Annotation Pipeline |
IMG Annotation Pipeline v.5.0.14 |
Added By | Supratim Mukherjee on 2020-02-12 |
Last Modified By | JGI automated process on 2021-10-11 |
ORF Comparison Tools
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PROJECT EXTERNAL REFERENCES | |
IMG Taxon ID
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3300038386 |
Genbank Accession
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Genbank Release Date |
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Genome Publication |
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ANALYSIS PROJECT COMPOSITION | |
Study |
Plant-associated microbial communities from Velloziaceae species in rupestrian grasslands, the National Park of Serra do Cipo, Brazil |
Number of Studies
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1 |
Number of Biosamples
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3 |
Number of Projects
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3 |
Number of Related Analysis Projects
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6 |
Derived Analysis Projects (DAP)
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0 |
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