ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0436370
Analysis Project Name Combined Assembly of Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil
Analysis Project Name Stem Combined Assembly of
Analysis Project Name Suffix Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil
Analysis Project Type Combined Assembly
IMG Submission ID 228883
Completion Status Complete
IMG Completion Date 2020-03-27
PI Rafael Oliveira
Analysis Project Description Co-assembly of bulk soil samples
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) MEGAHIT v. 1.2.7
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 1254935
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3137906
Estimated Size 2304499414
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.14
Added By Supratim Mukherjee on 2020-02-12
Last Modified By JGI automated process on 2022-06-18
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300038405
Genbank Accession
Genbank Release Date
Genome Publication
ANALYSIS PROJECT COMPOSITION
Study Plant-associated microbial communities from Velloziaceae species in rupestrian grasslands, the National Park of Serra do Cipo, Brazil
Number of Studies 1
Number of Biosamples 3
Number of Projects 3
Number of Related Analysis Projects 6
Derived Analysis Projects (DAP) 0

 

 

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