Studies
|
52,461 |
|
Biosamples
|
170,231 |
|
Sequencing Projects
|
472,496 |
|
Analysis Projects
|
343,313 |
| Organisms | 459,868 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0436370 |
| Analysis Project Name |
Combined Assembly of Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil |
| Analysis Project Name Stem |
Combined Assembly of |
|
Analysis Project Name Suffix
|
Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil |
|
Analysis Project Type
|
Combined Assembly |
|
IMG Submission ID
|
228883 |
| Completion Status |
Complete |
|
IMG Completion Date
|
2020-03-27 |
| PI | Rafael Oliveira |
|
Analysis Project Description
|
Co-assembly of bulk soil samples |
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
|
Assembly Method
(MIGS-30)
|
MEGAHIT v. 1.2.7 |
|
IMG Decontamination
|
No |
|
IMG Decontamination Method
|
|
|
Scaffold Count
|
1254935 |
|
Contig Count
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
3137906 |
| Estimated Size |
2304499414 |
|
Sequencing Depth
(MIGS-31.1)
|
|
| Genbank Anomalous Assembly |
|
| Genbank Anomalous Reason |
|
| Annotation Pipeline |
IMG Annotation Pipeline v.5.0.14 |
| Added By |
Supratim Mukherjee
on 2020-02-12 |
| Last Modified By |
JGI automated process
on 2021-10-11 |
|
ORF Comparison Tools
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
3300038405 |
|
Genbank Accession
|
|
| Genbank Release Date |
|
| Genome Publication |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Plant-associated microbial communities from Velloziaceae species in rupestrian grasslands, the National Park of Serra do Cipo, Brazil |
|
Number of Studies
|
1 |
|
Number of Biosamples
|
3 |
|
Number of Projects
|
3 |
|
Number of Related Analysis Projects
|
6 |
|
Derived Analysis Projects (DAP)
|
0 |
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