ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0436367
Analysis Project Name Prefix Combined Assembly of
Analysis Project Name Suffix Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil
Analysis Project Type Combined Assembly
IMG Submission ID 228882
Completion Status Complete
IMG Completion Date 2020-06-23
PI Rafael Oliveira
Analysis Project Description Co-assembly of rhizosphere samples
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) MEGAHIT v. 1.2.7
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 1021774
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 2679283
Estimated Size 2011735349
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.15
Added By Supratim Mukherjee on 2020-02-12
Last Modified By JGI automated process on 2021-10-11
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300039452
Genbank Accession
Genbank Release Date
Genome Publication
ANALYSIS PROJECT COMPOSITION
Study Plant-associated microbial communities from Velloziaceae species in rupestrian grasslands, the National Park of Serra do Cipo, Brazil
Number of Studies 1
Number of Biosamples 3
Number of Projects 3
Number of Related Analysis Projects 6
Derived Analysis Projects (DAP) 0

 

 

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