ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0436362
Analysis Project Name Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2
Analysis Project Name Stem Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3
Analysis Project Name Suffix v2
Analysis Project Type Metagenome Analysis
IMG Submission ID 228870
Completion Status Complete
IMG Completion Date 2020-06-24
PI Rafael Oliveira
Analysis Project Description New assembly
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) MEGAHIT v. 1.2.7
Scaffold Count 1306874
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1993072
Estimated Size 1109386096
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.15
Added By Antonio Camargo on 2020-02-12
Last Modified By JGI automated process on 2021-10-11
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300039453
IMG Metagenome bin count 0
IMG Predicted viruses
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Plant-associated microbial communities from Velloziaceae species in rupestrian grasslands, the National Park of Serra do Cipo, Brazil
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 2
Derived Analysis Projects (DAP) 0

 

 

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