ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0436327
Analysis Project Name Prefix Pseudomonas nitritireducens S00179
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 230384
Completion Status Complete
IMG Completion Date 2020-04-06
PI Camila Carlos-Shanley
PI Name
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.14.0
IMG Decontamination
IMG Decontamination Method
Scaffold Count 83
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 7313
Estimated Size 7578310
Sequencing Depth (MIGS-31.1) 198x
Annotation Pipeline IMG Annotation Pipeline v.5.0.14
Added By JGI automated process on 2020-02-08
Last Modified By JGI automated process on 2020-04-15
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2864926767
Genbank Accession
Genbank ID JACHLI000000000
Assembly Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Functional genomics of gut bacteria from endangered species of beetles
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1265121 (Portal)
ITS Analysis Project Name Pseudomonas nitritireducens S00179
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS Version Number 1

 

 

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