ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0435201
Analysis Project Name Prefix Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day5_3
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome mapping (other)
IMG Submission ID 229293
Completion Status Incomplete
IMG Completion Date
PI Steven W. Singer
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30)
Scaffold Count
Contig Count
Gene Calling Method (MIGS-32)
Gene Count
Estimated Size
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By JGI automated process on 2020-02-01
Last Modified By JGI automated process on 2020-03-10
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
IMG RNA-Seq ID 9851
IMG Metagenome bin count
IMG Predicted viruses
Genbank Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Lab enriched sorghum-adapted microbial communities from Joint BioEnergy Institute, Emeryville, California, United States
Number of Projects 1
Reference Analysis Project P4+WT+SM metagenomes combined assembly
JGI INFORMATION
ITS Analysis Project ID 1271288 (Portal)
ITS Analysis Project Name SM_Day5_3 metatranscriptome_mapped_to_IMG_dataset_3300033802 expression
ITS Analysis Product Name Metagenome Metatranscriptome Expression - Other
ITS Version Number 2

 

 

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