ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0435159
Analysis Project Name Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day14_8 (Metagenome Metatranscriptome Expression - Other)
Analysis Project Name Stem Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day14_8
Analysis Project Name Suffix - mapped to IMG dataset 3300031177 expression
Analysis Project Type Metatranscriptome mapping (other)
IMG Submission ID 229263
Completion Status Incomplete
IMG Completion Date
PI Steven W. Singer
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30)
Scaffold Count
Contig Count
Gene Calling Method (MIGS-32)
Gene Count
Estimated Size
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline
Added By JGI automated process on 2020-02-01
Last Modified By Supratim Mukherjee on 2023-02-11
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
IMG RNA-Seq ID 9738
Genbank Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Lab enriched sorghum-adapted microbial communities from Joint BioEnergy Institute, Emeryville, California, United States
Number of Projects 1
Reference Analysis Project Sorghum-adapted microbial communities enriched on stacked mutant (SM) sorghum from Joint BioEnergy Institute, Emeryville, California, United States - SM_Day14_8
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1271246 (Portal)
ITS Analysis Project Name SM_Day14_8 metatranscriptome_mapped_to_IMG_dataset_3300031177 expression
ITS Analysis Product Name Metagenome Metatranscriptome Expression - Other
ITS Version Number 3
Library Names
JGI Award DOI