Studies
|
56,290 |
|
Biosamples
|
195,545 |
|
Sequencing Projects
|
523,554 |
|
Analysis Projects
|
381,673 |
| Organisms | 484,046 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0417284 |
| Analysis Project Name |
Doriopsilla Microbiome 3 Co-Assembly |
|
Analysis Project Name Suffix
|
|
|
Analysis Project Type
|
Combined Assembly |
|
IMG Submission ID
|
226689 |
| Completion Status |
Complete |
|
IMG Completion Date
|
2020-02-26 |
| PI | Tanja Woyke |
|
Analysis Project Description
|
|
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
|
Assembly Method
(MIGS-30)
|
spades v. 3.13.0 |
|
IMG Decontamination
|
|
|
IMG Decontamination Method
|
|
|
Scaffold Count
|
99 |
|
Contig Count
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
1612 |
| Estimated Size |
1517502 |
|
Sequencing Depth
(MIGS-31.1)
|
|
| Genbank Anomalous Assembly |
|
| Genbank Anomalous Reason |
|
| Annotation Pipeline |
IMG Annotation Pipeline v.5.0.11 |
| Added By | JGI automated process on 2019-11-27 |
| Last Modified By | JGI automated process on 2022-05-25 |
|
ORF Comparison Tools
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
3300037667 |
|
Genbank Accession
|
|
| Genbank Release Date |
|
| SRA Runs |
|
| Genome Publication |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Biomass associated microbial communities from a wide range of natural environments and locations |
|
Number of Studies
|
1 |
|
Number of Biosamples
|
49 |
|
Number of Projects
|
49 |
|
Number of Related Analysis Projects
|
51 |
|
Derived Analysis Projects (DAP)
|
0 |
| JGI INFORMATION | |
|
JGI Data Utilization Status
|
Unrestricted |
|
ITS Analysis Project ID
|
1265492 (Portal) |
|
ITS Analysis Project Name
|
Doriopsilla Microbiome 3 Co-Assembly |
|
ITS Analysis Product Name
|
Combined Assembly |
| ITS Version Number |
1 |
|
Library Names
|
GSWSZ, GSWTB, GSWTC, GSWTG, GSWTN, GSWTP, GSWTS, GSWTT, GSWTU, GSWTW, GSWTX, GSWTY, GSWTZ, GSWUA, GSWUB, GSWUC, GSWUG, GSWUN, GSWUO, GSWUS, GSWUT, GSWUU, GSWUW, GSWUX, GSWUY, GSWUZ, GSWWA, GSWWB, GSWWC, GSWWH, GSWWN, GSWWO, GSWWP, GSWWS, GSWWZ, GSWXB, GSWXC, GSWXG, GSWXN, GSWXP, GSWXS, GSWXT, GSWXW, GSWXX, GSWXZ, GSWYA, GSWYB, GSWYG, GSWYH |
|
JGI Award DOI
|
10.46936/10.25585/60000940 |
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