ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0417094
Analysis Project Name Prefix Methylophaga nitratireducenticrescens JAM1
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 224532
Completion Status Incomplete
IMG Completion Date
PI Celine Villeneuve, Richard Villemur
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Newbler v. 2.5.3, Consed v. 20
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 1
Contig Count
Gene Calling Method (MIGS-32) Prodigal
Gene Count 2987
Estimated Size 3137100
Sequencing Depth (MIGS-31.1) 20x
Annotation Pipeline
Added By JGI automated process on 2019-11-08
Last Modified By Jon Bertsch on 2019-11-08
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
IMG RNA-Seq ID
Genbank
Genbank ID CP003390 (GCA_000260985.3)
Release Date 2019-10-18
NCBI Genbank Version CP003390.3
Assembly Accession GCA_000260985.3
Genbank Release Date 2019-10-18
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study JAM1
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 1
Derived Analysis Projects 0

 

 

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