Studies
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56,334 |
|
Biosamples
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196,988 |
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Sequencing Projects
|
525,360 |
|
Analysis Projects
|
384,991 |
| Organisms | 484,221 |
| ANALYSIS PROJECT INFORMATION | |||||
|---|---|---|---|---|---|
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GOLD Analysis Project ID
|
Ga0415782 |
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| Analysis Project Name |
Candidatus Sedimenticola endophacoides LUC001_P9 |
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Analysis Project Name Suffix
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Analysis Project Type
|
Metagenome-Assembled Genome |
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IMG Submission ID
|
|||||
|
NCBI BioProject Accession
|
PRJNA368737 |
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|
NCBI BioSample Accession
|
SAMN06271917 |
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| Completion Status |
Incomplete |
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|
IMG Completion Date
|
|
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| PI | Barbara Campbell | ||||
|
Analysis Project Description
|
Submitting a public MAG from NCBI/GenBank to IMG for analysis. |
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| Visibility | Public | ||||
| ANALYSIS PROJECT METADATA | |||||
| GOLD Organism Name |
Candidatus Sedimenticola endophacoides LUC001_P9 |
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|
NCBI Taxonomy ID
|
2548426 |
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| Phylum | PROTEOBACTERIA-GAMMA | ||||
| Phylogeny Suggestion |
|
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|
Genus
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| Species |
Candidatus Sedimenticola endophacoides LUC001_P9 |
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| Strain |
LUC001_P9 |
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| Domain |
BACTERIAL |
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| NCBI Superkingdom |
Bacteria |
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| NCBI Kingdom |
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Number of tRNAs
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|
tRNA Software
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Completeness Strategy
|
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Scaffold Count
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Contig Count
|
|
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Binning Method
|
MetaBat v0.32.4 |
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|
Binning Parameters
|
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Reassembly Attempted
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MAG Coverage Software
|
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|
Gene Calling Method
(MIGS-32)
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| Gene Count |
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| Estimated Size |
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Sequencing Depth
(MIGS-31.1)
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| Contamination Percentage |
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| Completeness Percentage |
|
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| Genbank Anomalous Assembly |
No |
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| Genbank Anomalous Reason |
|
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| Annotation Pipeline |
|
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| Added By | JGI automated process on 2019-10-23 | ||||
| Last Modified By | |||||
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ORF Comparison Tools
|
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16S Recovered
|
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|
16S Recovery Software
|
|
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| PROJECT EXTERNAL REFERENCES | |||||
|
IMG Taxon ID
|
|
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Genbank Accession
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| Genbank Release Date |
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| Genome Publication |
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| ANALYSIS PROJECT COMPOSITION | |||||
| Study |
Lucinid clam associated microbial communities from Wildcat Cove Preserve, Florida, USA |
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| Source Analysis Project |
Lucinid clam associated microbial communities from Wildcat Cove Preserve, Florida, USA - J1 |
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