Studies
|
56,334 |
|
Biosamples
|
196,988 |
|
Sequencing Projects
|
525,360 |
|
Analysis Projects
|
384,991 |
| Organisms | 484,221 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0415744 |
| Analysis Project Name |
Geotoga sp. 1-U2-L |
|
Analysis Project Name Suffix
|
|
|
Analysis Project Type
|
Metagenome-Assembled Genome |
|
IMG Submission ID
|
|
|
NCBI BioProject Accession
|
PRJNA308326 |
|
NCBI BioSample Accession
|
SAMN07462260 |
| Completion Status |
Incomplete |
|
IMG Completion Date
|
|
| PI | Kelly Wrighton |
|
Analysis Project Description
|
Submitting a public MAG from NCBI/GenBank to IMG for analysis. |
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
| GOLD Organism Name |
Geotoga sp. 1-U2-L |
|
NCBI Taxonomy ID
|
2301222 |
| Phylum | THERMOTOGOTA |
| Phylogeny Suggestion |
|
|
Genus
|
Geotoga |
| Species |
Geotoga sp. 1-U2-L |
| Strain |
1-U2-L |
| Domain |
BACTERIAL |
| NCBI Superkingdom |
Bacteria |
| NCBI Kingdom |
|
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Number of tRNAs
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|
tRNA Software
|
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Completeness Strategy
|
|
|
Scaffold Count
|
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Contig Count
|
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|
Binning Method
|
Custom binning using USEARCH, KEGG Orthology |
|
Binning Parameters
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Reassembly Attempted
|
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|
MAG Coverage Software
|
|
|
Gene Calling Method
(MIGS-32)
|
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| Gene Count |
|
| Estimated Size |
|
|
Sequencing Depth
(MIGS-31.1)
|
|
| Contamination Percentage |
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| Completeness Percentage |
|
| Genbank Anomalous Assembly |
|
| Genbank Anomalous Reason |
|
| Annotation Pipeline |
|
| Added By | JGI automated process on 2019-10-23 |
| Last Modified By | |
|
ORF Comparison Tools
|
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|
16S Recovered
|
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16S Recovery Software
|
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| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
|
|
Genbank Accession
|
|
| Genbank Release Date |
|
| Genome Publication |
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| ANALYSIS PROJECT COMPOSITION | |
| Study |
Deep subsurface shale carbon reservoir microbial communities from Ohio and West Virginia, USA |
| Source Analysis Project |
Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series 2014_10_20 (SPAdes) |
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