ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0411634
Analysis Project Name Metatranscriptome of enriched fungal communities from goat fecal pellet, Isla Vista, California, United States - Bagasse, Gen6, Rep 2, Penicillin and Streptomycin (Eukaryote Community Metatranscriptome)
Analysis Project Name Stem Metatranscriptome of enriched fungal communities from goat fecal pellet, Isla Vista, California, United States - Bagasse, Gen6, Rep 2, Penicillin and Streptomycin
Analysis Project Name Suffix (v2)
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 226778
Completion Status Complete
IMG Completion Date 2020-02-29
PI Michelle O'Malley
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 1.1.2
Scaffold Count 31766
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 36223
Estimated Size 33557294
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.11
Added By JGI automated process on 2019-10-08
Last Modified By Supratim Mukherjee on 2023-02-11
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300037676
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Determining the genomic basis for interactions between gut fungi and methanogenic archaea
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 2
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1261915 (Portal)
ITS Analysis Project Name Goat fecal pellet Enrichment Culture - Bagasse, Gen6, Rep 2, treated with Penicillin and Streptomycin(v2)
ITS Analysis Product Name Eukaryote Community Metatranscriptome
ITS Version Number 2
Library Names GPZGA
JGI Award DOI 10.46936/10.25585/60001061

 

 

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