ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0402096
Analysis Project Name Enriched cells of cold seep sediment from Santa Monica Basin, California, United States - ANME aggregate JGI_Orphan.7059.BNCT.2.N9
Analysis Project Name Suffix
Analysis Project Type Metagenome - Cell Enrichment
IMG Submission ID 222651
Completion Status Complete
IMG Completion Date 2019-11-18
PI Victoria Orphan
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.13.0
Scaffold Count 689
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 5710
Estimated Size 5348090
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.3
Added By JGI automated process on 2019-10-04
Last Modified By JGI automated process on 2022-05-25
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300036210
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Enriched cells of cold seep sediment from various locations in Pacific Ocean
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1258164 (Portal)
ITS Analysis Project Name ANME aggregate JGI_Orphan.7059.BNCT.2.N9
ITS Analysis Product Name Amplified, Targeted, Cell Enrichment
ITS Version Number 1
Library Names GSPWZ
JGI Award DOI 10.46936/fics.proj.2017.49956/60006219

 

 

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